How it works

FIShBOT Workflow:

The following schematic details the flow of data streams into the FIShBOT data product. Our near-real time data product pulls together both fishery-dependent (Commercial Fishing Fleet) and fishery-independent (Survey) oceanographic data and feeds it through our FIShBOT Program, which then turns it into one product (FIShBOT), a map of daily temperature averages across a 7km grid covering the Northwest Atlantic. This interorganizational effort relies on data being made publicly available through web-based scientific data servers (ERDDAP).

Refresh Interval

FIShBOT is updated dynamically every 24 hours. The dynamic refresh interval balances making real-time data accessible quickly and optimizing storage and performance. The contributing groups to FIShBOT rely on a rolling QA/QC schedule and often receive data at intermittent intervals from the fleet. To capture the dynamic nature of data contributing to FIShBOT, the program itself must be dynamic to reflect perpetual QA/QC efforts.

FIShBOT Program

FIShBOT is both a dataset and a Python program designed to synchronize and archive data from various sources to a standardized grid. The programatic side of this project has been designed to collect and combine data from each data server (ERDDAP above) and produces both a near-real-time data product and a companion fixed-version data product, which serves as an archive that captures each release of data. The source code lives in a public repository here:

GitHub Repo

FIShBOT documentation

FIShBOT Archive Citation

Each FIShBOT archive is minted a DOI for versioned citation. This is helpful if the data are incorporated into specific analysis or assessment for reproducibility. This is done automatically through the Zenodo API. The record of citations is collated in the FIShBOT Community on Zenodo.

FIShBOT Archive

Technical Memorandum

The full details of the system design, data flow, and methodology for this gridded data product are documented via a Technical Memorandum hosted by the Northeast Fisheries Science Center. This documentation is accessible to the public and can be downloaded as a PDF. Click the button below to access that Memorandum and learn more!

FIShBOT Technical Memorandum

Data Contributors

  • Study Fleet (NEFSC-NOAA)
  • eMOLT (GOMLF, NOAA, CCS, UMaine, CFRF, CFF, ODN, Rutgers)
  • ECOMON (NEFSC-NOAA)
  • Lobster & Jonah Crab Research Fleet (CFRF)
  • Shelf Research Fleet (CFRF)
  • South Fork Wind Farm (CFRF)
  • Oleander XBT (BIOS)
  • Pioneer Array (OOI)
  • Gloucester Marine Genomics Institute (GMGI)
  • IOOS Glider Data Assembly Center (HZ, IOOS, OOI, NAVOCEANO, RU, SBU, UDel, UMaine, UMass, UGA USF, VIMS, WHOI)